maps and ggplot 2 packages in r Search Results


ggplot2 package  (RStudio)
90
RStudio ggplot2 package
Ggplot2 Package, supplied by RStudio, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/ggplot2 package/product/RStudio
Average 90 stars, based on 1 article reviews
ggplot2 package - by Bioz Stars, 2026-03
90/100 stars
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2022.07.1 build 554  (RStudio)
90
RStudio 2022.07.1 build 554
2022.07.1 Build 554, supplied by RStudio, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/2022.07.1 build 554/product/RStudio
Average 90 stars, based on 1 article reviews
2022.07.1 build 554 - by Bioz Stars, 2026-03
90/100 stars
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prism v9.3.1  (GraphPad Software Inc)
90
GraphPad Software Inc prism v9.3.1
Expression of Bos taurus genes in different states of Theileria parva infection of bovine CD4 + T-cells. ( a ) The total number of expressed genes at day 0 (red), day 7 (green) and day 69 (blue). ( b ) Principal component analysis plot showing the first and second principle components; based on variance stabilized transformed counts of all expressed genes. ( c ) The number of significantly upregulated (red) or downregulated (blue) genes at day 7 and day 69, relative to day 0, as determined by DE analysis using DESeq2 (FDR ≤ 0.05 and L2FC |≤ 2|). ( d ) Distribution of all significantly DEGs according to the L2FC and −log(adjusted p -value) at day 7 and day 69, relative to day 0. ( e ) Expression of the top 100 significantly DEGs at day 7 and day 69, relative to day 0, displayed as z-score transformed counts. Created with ComplexHeatmap v2.12.1 and ggplot2 v3.4.2 in R Studio v2023.03.1, Graphpad Prism <t>v9.3.1</t> and BioRender.com.
Prism V9.3.1, supplied by GraphPad Software Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/prism v9.3.1/product/GraphPad Software Inc
Average 90 stars, based on 1 article reviews
prism v9.3.1 - by Bioz Stars, 2026-03
90/100 stars
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sas version 9.4  (SAS institute)
90
SAS institute sas version 9.4
Expression of Bos taurus genes in different states of Theileria parva infection of bovine CD4 + T-cells. ( a ) The total number of expressed genes at day 0 (red), day 7 (green) and day 69 (blue). ( b ) Principal component analysis plot showing the first and second principle components; based on variance stabilized transformed counts of all expressed genes. ( c ) The number of significantly upregulated (red) or downregulated (blue) genes at day 7 and day 69, relative to day 0, as determined by DE analysis using DESeq2 (FDR ≤ 0.05 and L2FC |≤ 2|). ( d ) Distribution of all significantly DEGs according to the L2FC and −log(adjusted p -value) at day 7 and day 69, relative to day 0. ( e ) Expression of the top 100 significantly DEGs at day 7 and day 69, relative to day 0, displayed as z-score transformed counts. Created with ComplexHeatmap v2.12.1 and ggplot2 v3.4.2 in R Studio v2023.03.1, Graphpad Prism <t>v9.3.1</t> and BioRender.com.
Sas Version 9.4, supplied by SAS institute, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/sas version 9.4/product/SAS institute
Average 90 stars, based on 1 article reviews
sas version 9.4 - by Bioz Stars, 2026-03
90/100 stars
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graphpad prism 10  (GraphPad Software Inc)
90
GraphPad Software Inc graphpad prism 10
Expression of Bos taurus genes in different states of Theileria parva infection of bovine CD4 + T-cells. ( a ) The total number of expressed genes at day 0 (red), day 7 (green) and day 69 (blue). ( b ) Principal component analysis plot showing the first and second principle components; based on variance stabilized transformed counts of all expressed genes. ( c ) The number of significantly upregulated (red) or downregulated (blue) genes at day 7 and day 69, relative to day 0, as determined by DE analysis using DESeq2 (FDR ≤ 0.05 and L2FC |≤ 2|). ( d ) Distribution of all significantly DEGs according to the L2FC and −log(adjusted p -value) at day 7 and day 69, relative to day 0. ( e ) Expression of the top 100 significantly DEGs at day 7 and day 69, relative to day 0, displayed as z-score transformed counts. Created with ComplexHeatmap v2.12.1 and ggplot2 v3.4.2 in R Studio v2023.03.1, Graphpad Prism <t>v9.3.1</t> and BioRender.com.
Graphpad Prism 10, supplied by GraphPad Software Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/graphpad prism 10/product/GraphPad Software Inc
Average 90 stars, based on 1 article reviews
graphpad prism 10 - by Bioz Stars, 2026-03
90/100 stars
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ggplot 2 package  (RStudio)
90
RStudio ggplot 2 package
Expression of Bos taurus genes in different states of Theileria parva infection of bovine CD4 + T-cells. ( a ) The total number of expressed genes at day 0 (red), day 7 (green) and day 69 (blue). ( b ) Principal component analysis plot showing the first and second principle components; based on variance stabilized transformed counts of all expressed genes. ( c ) The number of significantly upregulated (red) or downregulated (blue) genes at day 7 and day 69, relative to day 0, as determined by DE analysis using DESeq2 (FDR ≤ 0.05 and L2FC |≤ 2|). ( d ) Distribution of all significantly DEGs according to the L2FC and −log(adjusted p -value) at day 7 and day 69, relative to day 0. ( e ) Expression of the top 100 significantly DEGs at day 7 and day 69, relative to day 0, displayed as z-score transformed counts. Created with ComplexHeatmap v2.12.1 and ggplot2 v3.4.2 in R Studio v2023.03.1, Graphpad Prism <t>v9.3.1</t> and BioRender.com.
Ggplot 2 Package, supplied by RStudio, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/ggplot 2 package/product/RStudio
Average 90 stars, based on 1 article reviews
ggplot 2 package - by Bioz Stars, 2026-03
90/100 stars
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ggplot2 package in r (version 3.0.3)  (Novogene)
90
Novogene ggplot2 package in r (version 3.0.3)
Expression of Bos taurus genes in different states of Theileria parva infection of bovine CD4 + T-cells. ( a ) The total number of expressed genes at day 0 (red), day 7 (green) and day 69 (blue). ( b ) Principal component analysis plot showing the first and second principle components; based on variance stabilized transformed counts of all expressed genes. ( c ) The number of significantly upregulated (red) or downregulated (blue) genes at day 7 and day 69, relative to day 0, as determined by DE analysis using DESeq2 (FDR ≤ 0.05 and L2FC |≤ 2|). ( d ) Distribution of all significantly DEGs according to the L2FC and −log(adjusted p -value) at day 7 and day 69, relative to day 0. ( e ) Expression of the top 100 significantly DEGs at day 7 and day 69, relative to day 0, displayed as z-score transformed counts. Created with ComplexHeatmap v2.12.1 and ggplot2 v3.4.2 in R Studio v2023.03.1, Graphpad Prism <t>v9.3.1</t> and BioRender.com.
Ggplot2 Package In R (Version 3.0.3), supplied by Novogene, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/ggplot2 package in r (version 3.0.3)/product/Novogene
Average 90 stars, based on 1 article reviews
ggplot2 package in r (version 3.0.3) - by Bioz Stars, 2026-03
90/100 stars
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ggplot2 function  (SourceForge net)
90
SourceForge net ggplot2 function
Expression of Bos taurus genes in different states of Theileria parva infection of bovine CD4 + T-cells. ( a ) The total number of expressed genes at day 0 (red), day 7 (green) and day 69 (blue). ( b ) Principal component analysis plot showing the first and second principle components; based on variance stabilized transformed counts of all expressed genes. ( c ) The number of significantly upregulated (red) or downregulated (blue) genes at day 7 and day 69, relative to day 0, as determined by DE analysis using DESeq2 (FDR ≤ 0.05 and L2FC |≤ 2|). ( d ) Distribution of all significantly DEGs according to the L2FC and −log(adjusted p -value) at day 7 and day 69, relative to day 0. ( e ) Expression of the top 100 significantly DEGs at day 7 and day 69, relative to day 0, displayed as z-score transformed counts. Created with ComplexHeatmap v2.12.1 and ggplot2 v3.4.2 in R Studio v2023.03.1, Graphpad Prism <t>v9.3.1</t> and BioRender.com.
Ggplot2 Function, supplied by SourceForge net, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/ggplot2 function/product/SourceForge net
Average 90 stars, based on 1 article reviews
ggplot2 function - by Bioz Stars, 2026-03
90/100 stars
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matlab 2017a  (MathWorks Inc)
90
MathWorks Inc matlab 2017a
Expression of Bos taurus genes in different states of Theileria parva infection of bovine CD4 + T-cells. ( a ) The total number of expressed genes at day 0 (red), day 7 (green) and day 69 (blue). ( b ) Principal component analysis plot showing the first and second principle components; based on variance stabilized transformed counts of all expressed genes. ( c ) The number of significantly upregulated (red) or downregulated (blue) genes at day 7 and day 69, relative to day 0, as determined by DE analysis using DESeq2 (FDR ≤ 0.05 and L2FC |≤ 2|). ( d ) Distribution of all significantly DEGs according to the L2FC and −log(adjusted p -value) at day 7 and day 69, relative to day 0. ( e ) Expression of the top 100 significantly DEGs at day 7 and day 69, relative to day 0, displayed as z-score transformed counts. Created with ComplexHeatmap v2.12.1 and ggplot2 v3.4.2 in R Studio v2023.03.1, Graphpad Prism <t>v9.3.1</t> and BioRender.com.
Matlab 2017a, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/matlab 2017a/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
matlab 2017a - by Bioz Stars, 2026-03
90/100 stars
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tidyverse  (RStudio)
90
RStudio tidyverse
Expression of Bos taurus genes in different states of Theileria parva infection of bovine CD4 + T-cells. ( a ) The total number of expressed genes at day 0 (red), day 7 (green) and day 69 (blue). ( b ) Principal component analysis plot showing the first and second principle components; based on variance stabilized transformed counts of all expressed genes. ( c ) The number of significantly upregulated (red) or downregulated (blue) genes at day 7 and day 69, relative to day 0, as determined by DE analysis using DESeq2 (FDR ≤ 0.05 and L2FC |≤ 2|). ( d ) Distribution of all significantly DEGs according to the L2FC and −log(adjusted p -value) at day 7 and day 69, relative to day 0. ( e ) Expression of the top 100 significantly DEGs at day 7 and day 69, relative to day 0, displayed as z-score transformed counts. Created with ComplexHeatmap v2.12.1 and ggplot2 v3.4.2 in R Studio v2023.03.1, Graphpad Prism <t>v9.3.1</t> and BioRender.com.
Tidyverse, supplied by RStudio, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/tidyverse/product/RStudio
Average 90 stars, based on 1 article reviews
tidyverse - by Bioz Stars, 2026-03
90/100 stars
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r studio 2022.07.1 build 554  (RStudio)
90
RStudio r studio 2022.07.1 build 554
Expression of Bos taurus genes in different states of Theileria parva infection of bovine CD4 + T-cells. ( a ) The total number of expressed genes at day 0 (red), day 7 (green) and day 69 (blue). ( b ) Principal component analysis plot showing the first and second principle components; based on variance stabilized transformed counts of all expressed genes. ( c ) The number of significantly upregulated (red) or downregulated (blue) genes at day 7 and day 69, relative to day 0, as determined by DE analysis using DESeq2 (FDR ≤ 0.05 and L2FC |≤ 2|). ( d ) Distribution of all significantly DEGs according to the L2FC and −log(adjusted p -value) at day 7 and day 69, relative to day 0. ( e ) Expression of the top 100 significantly DEGs at day 7 and day 69, relative to day 0, displayed as z-score transformed counts. Created with ComplexHeatmap v2.12.1 and ggplot2 v3.4.2 in R Studio v2023.03.1, Graphpad Prism <t>v9.3.1</t> and BioRender.com.
R Studio 2022.07.1 Build 554, supplied by RStudio, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/r studio 2022.07.1 build 554/product/RStudio
Average 90 stars, based on 1 article reviews
r studio 2022.07.1 build 554 - by Bioz Stars, 2026-03
90/100 stars
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ggplot2  (Verlag GmbH)
90
Verlag GmbH ggplot2
Expression of Bos taurus genes in different states of Theileria parva infection of bovine CD4 + T-cells. ( a ) The total number of expressed genes at day 0 (red), day 7 (green) and day 69 (blue). ( b ) Principal component analysis plot showing the first and second principle components; based on variance stabilized transformed counts of all expressed genes. ( c ) The number of significantly upregulated (red) or downregulated (blue) genes at day 7 and day 69, relative to day 0, as determined by DE analysis using DESeq2 (FDR ≤ 0.05 and L2FC |≤ 2|). ( d ) Distribution of all significantly DEGs according to the L2FC and −log(adjusted p -value) at day 7 and day 69, relative to day 0. ( e ) Expression of the top 100 significantly DEGs at day 7 and day 69, relative to day 0, displayed as z-score transformed counts. Created with ComplexHeatmap v2.12.1 and ggplot2 v3.4.2 in R Studio v2023.03.1, Graphpad Prism <t>v9.3.1</t> and BioRender.com.
Ggplot2, supplied by Verlag GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/ggplot2/product/Verlag GmbH
Average 90 stars, based on 1 article reviews
ggplot2 - by Bioz Stars, 2026-03
90/100 stars
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Image Search Results


Expression of Bos taurus genes in different states of Theileria parva infection of bovine CD4 + T-cells. ( a ) The total number of expressed genes at day 0 (red), day 7 (green) and day 69 (blue). ( b ) Principal component analysis plot showing the first and second principle components; based on variance stabilized transformed counts of all expressed genes. ( c ) The number of significantly upregulated (red) or downregulated (blue) genes at day 7 and day 69, relative to day 0, as determined by DE analysis using DESeq2 (FDR ≤ 0.05 and L2FC |≤ 2|). ( d ) Distribution of all significantly DEGs according to the L2FC and −log(adjusted p -value) at day 7 and day 69, relative to day 0. ( e ) Expression of the top 100 significantly DEGs at day 7 and day 69, relative to day 0, displayed as z-score transformed counts. Created with ComplexHeatmap v2.12.1 and ggplot2 v3.4.2 in R Studio v2023.03.1, Graphpad Prism v9.3.1 and BioRender.com.

Journal: Scientific Reports

Article Title: Comparative transcriptional analysis identifies genes associated with the attenuation of Theileria parva infected cells after long-term in vitro culture

doi: 10.1038/s41598-024-59197-y

Figure Lengend Snippet: Expression of Bos taurus genes in different states of Theileria parva infection of bovine CD4 + T-cells. ( a ) The total number of expressed genes at day 0 (red), day 7 (green) and day 69 (blue). ( b ) Principal component analysis plot showing the first and second principle components; based on variance stabilized transformed counts of all expressed genes. ( c ) The number of significantly upregulated (red) or downregulated (blue) genes at day 7 and day 69, relative to day 0, as determined by DE analysis using DESeq2 (FDR ≤ 0.05 and L2FC |≤ 2|). ( d ) Distribution of all significantly DEGs according to the L2FC and −log(adjusted p -value) at day 7 and day 69, relative to day 0. ( e ) Expression of the top 100 significantly DEGs at day 7 and day 69, relative to day 0, displayed as z-score transformed counts. Created with ComplexHeatmap v2.12.1 and ggplot2 v3.4.2 in R Studio v2023.03.1, Graphpad Prism v9.3.1 and BioRender.com.

Article Snippet: Created with ComplexHeatmap v2.12.1 and ggplot2 v3.4.2 in R Studio v2023.03.1, Graphpad Prism v9.3.1 and BioRender.com.

Techniques: Expressing, Infection, Transformation Assay

Expression of Theileria parva genes in different states of T. parva infection of bovine CD4 + T-cells. ( a ) The total number of expressed genes at day 7 (green) and day 69 (blue). ( b ) Principal component analysis plot showing the first and second principle components; based on variance stabilized transformed counts of all expressed genes. ( c ) The number of significantly upregulated (red) or downregulated (blue) genes day 69 compared to day 7, as determined by DE analysis using DESeq2 (FDR ≤ 0.05 and L2FC |≤ 2|). ( d ) Distribution of all significantly DEGs according to the L2FC and -log(adjusted p-value) at day 69 compared to day 7. ( e ) Expression of the all significantly DEGs at day 69 compared to day 7, displayed as z-score transformed counts. Created with ComplexHeatmap v2.12.1 and ggplot2 v3.4.2 in R Studio v2023.03.1, Graphpad Prism v9.3.1 and BioRender.com.

Journal: Scientific Reports

Article Title: Comparative transcriptional analysis identifies genes associated with the attenuation of Theileria parva infected cells after long-term in vitro culture

doi: 10.1038/s41598-024-59197-y

Figure Lengend Snippet: Expression of Theileria parva genes in different states of T. parva infection of bovine CD4 + T-cells. ( a ) The total number of expressed genes at day 7 (green) and day 69 (blue). ( b ) Principal component analysis plot showing the first and second principle components; based on variance stabilized transformed counts of all expressed genes. ( c ) The number of significantly upregulated (red) or downregulated (blue) genes day 69 compared to day 7, as determined by DE analysis using DESeq2 (FDR ≤ 0.05 and L2FC |≤ 2|). ( d ) Distribution of all significantly DEGs according to the L2FC and -log(adjusted p-value) at day 69 compared to day 7. ( e ) Expression of the all significantly DEGs at day 69 compared to day 7, displayed as z-score transformed counts. Created with ComplexHeatmap v2.12.1 and ggplot2 v3.4.2 in R Studio v2023.03.1, Graphpad Prism v9.3.1 and BioRender.com.

Article Snippet: Created with ComplexHeatmap v2.12.1 and ggplot2 v3.4.2 in R Studio v2023.03.1, Graphpad Prism v9.3.1 and BioRender.com.

Techniques: Expressing, Infection, Transformation Assay